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1

Mitochondrial genome structure and evolution in the living fossil vampire squid, Vampyroteuthis infernalis, and extant cephalopods

Shin-ichi Yokobori, Dhugal J. Lindsay, Mari Yoshida, Kotaro Tsuchiya, Akihiko Yamagishi, Tadashi Maruyama, Tairo Oshima

Journal:

Molecular Phylogenetics and Evolution

Year:

2007

Language:

english

File:

PDF, 259 KB

english, 2007

2

Complete nucleotide sequences of mitochondrial genomes of two solitary entoprocts, Loxocorone allax and Loxosomella aloxiata: Implications for lophotrochozoan phylogeny

Shin-ichi Yokobori, Tohru Iseto, Shuichi Asakawa, Takashi Sasaki, Nobuyoshi Shimizu, Akihiko Yamagishi, Tairo Oshima, Euichi Hirose

Journal:

Molecular Phylogenetics and Evolution

Year:

2008

Language:

english

File:

PDF, 437 KB

english, 2008

3

Mitochondrial Genome ofCiona savignyi(Urochordata, Ascidiacea, Enterogona): Comparison of Gene Arrangement and tRNA Genes withHalocynthia roretziMitochondrial Genome

Shin-ichi Yokobori, Yukari Watanabe, Tairo Oshima

Journal:

Journal of Molecular Evolution

Year:

2003

Language:

english

File:

PDF, 439 KB

english, 2003

4

Highly efficient production of enzymes of an extreme thermophile,Thermus thermophilus: A practical method to overexpress GC-rich genes inEscherichia coli

Masami Ishida, Masasuke Yoshida, Tairo Oshima

Journal:

Year:

1997

Language:

english

File:

PDF, 312 KB

english, 1997

5

A Preliminary Analysis of Microbial and Biochemical Properties of High-Temperature Compost

Tairo Oshima, Toshiyuki Moriya

Journal:

Annals of the New York Academy of Sciences

Year:

2008

Language:

english

File:

PDF, 669 KB

english, 2008

6

On the anaerobic metabolism of aromatic compounds in the presence of nitrate by soil microorganisms

Journal:

Journal of Basic Microbiology

Year:

1965

Language:

english

File:

PDF, 576 KB

english, 1965

7

Is bacteriophage φX174 DNA a message from an extraterrestrial intelligence?

Hiromitsu Yokoo, Tairo Oshima

Journal:

Year:

1979

Language:

english

File:

PDF, 2.33 MB

english, 1979

8

Complete nucleotide sequence of the mitochondrial genome of Doliolum nationalis with implications for evolution of urochordates

Shin-ichi Yokobori, Tairo Oshima, Hiroshi Wada

Journal:

Molecular Phylogenetics and Evolution

Year:

2005

Language:

english

File:

PDF, 613 KB

english, 2005

9

Metabolic characteristics of an isocitrate dehydrogenase defective derivative of escherichia coli BL21(DE3)

Miho Aoshima, Masaharu Ishii, Akihiko Yamagishi, Tairo Oshima, Yasuo Igarashi

Journal:

Biotechnology and Bioengineering

Year:

2003

Language:

english

File:

PDF, 115 KB

english, 2003

10

ChemInform Abstract: Synthetic and Mechanistic Studies of (2R,3S)-3-Vinylmalic Acid as a Mechanism-Based Inhibitor of 3-Isopropylmalate Dehydrogenase.

Akira Chiba, Tetsuya Aoyama, Rieko Suzuki, Tadashi Eguchi, Tairo Oshima, Katsumi Kakinuma

Journal:

Year:

2000

File:

PDF, 25 KB

2000

11

Synthesis and Analysis of Nucleosides Bearing Pyrrolepolyamide Binding to DNA

Etsuko Kawashima, Daisuke Itoh, Kazuo Kamaike, Yusuke Terui, Tairo Oshima

Journal:

Year:

2004

File:

PDF, 59 KB

2004

12

Potentiometric study by amalgam electrodes of the interaction between Escherichia coli tRNA and divalent copper, zinc, or cadmium ion in an aqueous neutral buffer solution

Hideki Yamaoka, Tairo Oshima

Journal:

Analytical Biochemistry

Year:

1977

Language:

english

File:

PDF, 490 KB

english, 1977

13

Synthesis and physical properties of phosphatidylcholines containing ω-cyclohexyl fatty acyl chains

Tamao Endo, Keizo Inoue, Shoshichi Nojima, Shiro Terashima, Tairo Oshima

Journal:

Chemistry and Physics of Lipids

Year:

1982

Language:

english

File:

PDF, 683 KB

english, 1982

14

Survey of CELSS concepts and preliminary research in Japan

Haruhiko Ohya, Tairo Oshima, Keiji Nitta

Journal:

Advances in Space Research

Year:

1984

Language:

english

File:

PDF, 391 KB

english, 1984

15

Enigmas of biosyntheses of unusual polyamines in an extreme thermophile, Thermus thermophilus

Journal:

Plant Physiology and Biochemistry

Year:

2010

Language:

english

File:

PDF, 153 KB

english, 2010

16

A novel chiral thiol reagent for automated precolumn derivatization and high-performance liquid chromatographic enantioseparation of amino acids and its application to the aspartate racemase assay

Noriyuki Nimura, Takako Fujiwara, Aya Watanabe, Masae Sekine, Takemitsu Furuchi, Masafumi Yohda, Akihiko Yamagishi, Tairo Oshima, Hiroshi Homma

Journal:

Analytical Biochemistry

Year:

2003

Language:

english

File:

PDF, 153 KB

english, 2003

17

Simple assay methods for ribonuclease T1, T2, and nuclease P1

Tairo Oshima, Noriaki Uenishi, Kazutomo Imahori

Journal:

Analytical Biochemistry

Year:

1976

Language:

english

File:

PDF, 136 KB

english, 1976

18

Identification and characterization of tRNA (Gm18) methyltransferase from Thermus thermophilus HB8: domain structure and conserved amino acid sequence motifs

Hiroyuki Hori, Tsutomu Suzuki, Kazumasa Sugawara, Yorinao Inoue, Takehiko Shibata, Seiki Kuramitsu, Shigeyuki Yokoyama, Tairo Oshima, Kimitsuna Watanabe

Journal:

Year:

2002

Language:

english

File:

PDF, 2.07 MB

english, 2002

19

A stable intermediate in the thermal unfolding process of a chimeric 3-isopropylmalate dehydrogenase between a thermophilic and a mesophilic enzymes

Yoko Hayashi-Iwasaki, Koichi Numata, Akihiko Yamagishi, Katsuhide Yutani, Masahiro Sakurai, Nobuo Tanaka, Tairo Oshima

Journal:

Protein Science

Year:

1996

Language:

english

File:

PDF, 1.54 MB

english, 1996

20

Serial increase in the thermal stability of 3-isopropylmalate dehydrogenase from Bacillus subtilis by experimental evolution

Satoshi Akanuma, Akihiko Yamagishi, Tairo Oshima, Nobuo Tanaka

Journal:

Protein Science

Year:

1998

Language:

english

File:

PDF, 856 KB

english, 1998

21

Fujio Egami 1910–1982

Journal:

Origins of Life and Evolution of Biospheres

Year:

1982

Language:

english

File:

PDF, 421 KB

english, 1982

22

Comparative studies on biochemical properties of protein synthesis of an archaebacteria,Thermoplasmasp.

Masayuki Ohba, Tairo Oshima

Journal:

Origins of Life and Evolution of Biospheres

Year:

1982

Language:

english

File:

PDF, 248 KB

english, 1982

23

Some biochemical properties of an acido-thermophilic archaebacterium,Sulfolobus acidocaldarius

Tairo Oshima, Masayuki Ohba, Takayoshi Wagaki

Journal:

Origins of Life and Evolution of Biospheres

Year:

1984

Language:

english

File:

PDF, 223 KB

english, 1984

24

Abiotic synthesis of amino acids and imidazole by proton irradiation of simulated primitive earth atmospheres

Kensei Kobayashi, Masahiko Tsuchiya, Tairo Oshima, Hiroshi Yanagawa

Journal:

Origins of Life and Evolution of Biospheres

Year:

1990

Language:

english

File:

PDF, 703 KB

english, 1990

25

Energy metabolism of a thermoacidophilic archaebacterium,Sulfolobus acidocaldarius

Takayoshi Wakagi, Tairo Oshima

Journal:

Origins of Life and Evolution of Biospheres

Year:

1987

Language:

english

File:

PDF, 495 KB

english, 1987

26

Abiotic synthes is of amino acids by proton irradiation of simulated primitive earth atmospheres

Kensei Kobayashi, Masahiko Tsuchiya, Tairo Oshima, Hiroshi Yanagawa

Journal:

Origins of Life and Evolution of Biospheres

Year:

1989

Language:

english

File:

PDF, 163 KB

english, 1989

27

Energy metabolism of an acido-thermophilic archaebacterium, Sulfolobus acidocaldarius

Tairo Oshima, Takayoshi Wakagi

Journal:

Origins of Life and Evolution of Biospheres

Year:

1986

Language:

english

File:

PDF, 142 KB

english, 1986

28

The CephalopodLoligo bleekeriMitochondrial Genome: Multiplied Noncoding Regions and Transposition of tRNA Genes

Kozo Tomita, Shin-ichi Yokobori, Tairo Oshima, Takuya Ueda, Kimitsuna Watanabe

Journal:

Journal of Molecular Evolution

Year:

2002

Language:

english

File:

PDF, 746 KB

english, 2002

29

Characterization of the precursor of tetraether lipid biosynthesis in the thermoacidophilic archaeonThermoplasma acidophilum

Naoki Nemoto, Yasuo Shida, Haruo Shimada, Tairo Oshima, Akihiko Yamagishi

Journal:

Year:

2003

Language:

english

File:

PDF, 453 KB

english, 2003

30

Structural analysis of the plasmid pTA1 isolated from the thermoacidophilic archaeonThermoplasma acidophilum

Kan Yamashiro, Shin-ichi Yokobori, Tairo Oshima, Akihiko Yamagishi

Journal:

Year:

2006

Language:

english

File:

PDF, 542 KB

english, 2006

31

Selection of stabilized 3-isopropylmalate dehydrogenase ofSaccharomyces cerevisiaeusing the host-vector system of an extreme thermophile,Thermus thermophilus

Masatada Tamakoshi, Yumiko Nakano, Shigeyuki Kakizawa, Akihiko Yamagishi, Tairo Oshima

Journal:

Year:

2001

Language:

english

File:

PDF, 130 KB

english, 2001

32

Sulfolobus tokodaiisp. nov. (f.Sulfolobussp. strain 7), a new member of the genusSulfolobusisolated from Beppu Hot Springs, Japan

Toshiharu Suzuki, Toshio Iwasaki, Taketoshi Uzawa, Kurt Hara, Naoki Nemoto, Takahide Kon, Toshiaki Ueki, Akihiko Yamagishi, Tairo Oshima

Journal:

Year:

2002

Language:

english

File:

PDF, 129 KB

english, 2002

33

Infra-red absorption spectra α:β-tetradeutero-l-alanine and perdeutero-l-alanine

Tairo Oshima, Nobuo Tamiya

Journal:

Spectrochimica Acta

Year:

1961

Language:

english

File:

PDF, 232 KB

english, 1961

34

Synthesis of conformationally restricted substrate analogs and their interaction with 3-isopropylmalate dehydrogenase derived from Thermus thermophilus

Akira Chiba, Tadashi Eguchi, Tairo Oshima, Katsumi Kakinuma

Journal:

Year:

1997

Language:

english

File:

PDF, 409 KB

english, 1997

35

Synthesis of cyclopropane substrate analog for 3-isopropylmalate dehydrogenase and its mechanism-based inhibition

Akira Chiba, Tadashi Eguchi, Tairo Oshima, Katsumi Kakinuma

Journal:

Year:

1999

Language:

english

File:

PDF, 576 KB

english, 1999

36

The substrate specificity of tRNA (m1G37) methyltransferase (TrmD) from Aquifex aeolicus

Hiroshi Takeda, Takashi Toyooka, Yoshiho Ikeuchi, Shin-ichi Yokobori, Kan Okadome, Fuyumi Takano, Tairo Oshima, Tsutomu Suzuki, Yaeta Endo, Hiroyuki Hori

Journal:

Year:

2006

Language:

english

File:

PDF, 401 KB

english, 2006

37

Screening of stable proteins in an extreme thermophile, Thermus thermophilus

Masatada Tamakoshi, Akihiko Yamagishi, Tairo Oshima

Journal:

Molecular Microbiology

Year:

1995

Language:

english

File:

PDF, 1.55 MB

english, 1995

38

The plasmids found in isolates of the acidothermophilic archaebacterium Thermoplasma acidophilum

Moriyoshi Yasuda, Akihiko Yamagishi, Tairo Oshima

Journal:

FEMS Microbiology Letters

Year:

1995

Language:

english

File:

PDF, 432 KB

english, 1995

39

Purification and characterization of 3-isopropylmalate dehydrogenase from a thermoacidophilic archaebacterium Sulfolobus sp. strain 7

Emiri Yoda, Yoriko Anraku, Hiromi Kirino, Takayoshi Wakagi, Tairo Oshima

Journal:

FEMS Microbiology Letters

Year:

1995

Language:

english

File:

PDF, 368 KB

english, 1995

40

A leader open reading frame is essential for the expression in Escherichia coli of GC-rich leuB gene of an extreme thermophile, Thermus thermophilus

Masami Ishida, Tairo Oshima

Journal:

FEMS Microbiology Letters

Year:

1996

Language:

english

File:

PDF, 469 KB

english, 1996

41

Role of cytochrome b562 in the archaeal aerobic respiratory chain of Sulfolobus sp. strain 7

Toshio Iwasaki, Tairo Oshima

Journal:

FEMS Microbiology Letters

Year:

1996

Language:

english

File:

PDF, 658 KB

english, 1996

42

An efficient gene replacement and deletion system for an extreme thermophile, Thermus thermophilus

Masatada Tamakoshi, Takuro Yaoi, Tairo Oshima, Akihiko Yamagishi

Journal:

FEMS Microbiology Letters

Year:

1999

Language:

english

File:

PDF, 361 KB

english, 1999

43

Overexpression in Escherichia coli of the AT-rich trpA and trpB genes from the hyperthermophilic archaeon Pyrococcus furiosus

Masami Ishida, Tairo Oshima, Katsuhide Yutani

Journal:

FEMS Microbiology Letters

Year:

2002

Language:

english

File:

PDF, 233 KB

english, 2002

44

Novel zinc-binding centre in thermoacidophilic archaeal ferredoxins

Fujii, Tomomi, Hata, Yasuo, Wakagi, Takayoshi, Tanaka, Nobuo, Oshima, Tairo

Journal:

Natural Structural Biology

Year:

1996

File:

PDF, 604 KB

1996

45

Amino Acid Formation in Gas Mixtures by High Energy Particle Irradiation

Kensei Kobayashi, Takeo Kaneko, Takeshi Saito, Tairo Oshima

Journal:

Origins of Life and Evolution of Biospheres

Year:

1998

Language:

english

File:

PDF, 94 KB

english, 1998

46

Purification, some properties and amino acid sequence of Thermus Thermophilus HB8 ferredoxin

Showbu Sato, Kayoko Nakazawa, Koyu Hon-Nami, Tairo Oshima

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure

Year:

1981

Language:

english

File:

PDF, 851 KB

english, 1981

47

An extremely stable inorganic pyrophosphatase purified from the cytosol of a thermoacidophilic archaebacterium, Sulfolobus acidocaldarius strain 7

Takayoshi Wakagi, Choon-Ho Lee, Tairo Oshima

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1992

Language:

english

File:

PDF, 592 KB

english, 1992

48

Thermostabilization of a chimeric enzyme by residue substitutions: four amino acid residues in loop regions are responsible for the thermostability of Thermus thermophilus isopropylmalate dehydrogenase

Koichi Numata, Yoko Hayashi-Iwasaki, Jitsutaro Kawaguchi, Masahiro Sakurai, Hideaki Moriyama, Nobuo Tanaka, Tairo Oshima

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

2001

Language:

english

File:

PDF, 1.14 MB

english, 2001

49

Purification, catalytic properties and thermostability of 3-isopropylmalate dehydrogenase from Escherichia coli

Gerlind Wallon, Kazutaka Yamamoto, Hiromi Kirino, Akihiko Yamagishi, Susan T. Lovett, Gregory A. Petsko, Tairo Oshima

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1997

Language:

english

File:

PDF, 539 KB

english, 1997

50

Purification and characterization of isocitrate dehydrogenase from a hyperthermophilic archaebacterium, Caldococcus noboribetus

Miho Aoshima, Tairo Oshima

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1997

Language:

english

File:

PDF, 191 KB

english, 1997

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